CDS
| Accession Number | TCMCG057C01982 |
| gbkey | CDS |
| Protein Id | XP_018436115.1 |
| Location | complement(join(8584348..8584423,8584521..8584576,8584662..8584722,8584819..8584892,8585041..8585121,8585241..8585315,8585402..8585521,8585602..8585682,8585773..8585841,8586007..8586078,8586186..8586232,8586716..8586827,8586993..8587101,8587219..8587553,8587655..8587792)) |
| Gene | LOC108808475 |
| GeneID | 108808475 |
| Organism | Raphanus sativus |
Protein
| Length | 501aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018580613.1 |
| Definition | PREDICTED: putative tRNA pseudouridine synthase Pus10 [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | J |
| Description | tRNA pseudouridine synthase |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03016 [VIEW IN KEGG] |
| KEGG_ko |
ko:K07583
[VIEW IN KEGG] |
| EC |
5.4.99.25
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGTCCGACGAAACAAAACCCTCGTCCGGCGACTCATCCGGTCTTTCCAACGGCCTCGTAAGCGACAGTGACCGACGCGTGTACGAAGCAGCTCGATCACTACACTCTAGTGCTGTCAAAGATCTGCTATCTCTCGGGGTGTGCGAGAGATGTATTTTCCGATTGGTATCCGCCGAGCCTTTCGATTCCGATCTGTCATCAGTCTCGGCGTCAACTCTACGGAGCTGGCTAGAGGAAGCTTCTGCTGCTGCTGCTGCTGCTTCGTCGGAGGCTAGAGTCTGCATTGTCTGTTTAGGTGTATTGCAGTTCGTTTTCTCCGTTGATGCGAAACAAACGCTGGCGAGATCGGAGTGTGGTAGTGACTACGCTGCAAGGGTAACGGAGTTGGTGAAGCGGGAAGGTCATGAGTTCGATAGCTTTGGTTTAGAAGTCTCTGTGCCATCAGCTGTCGTGGAGAATGAGCGTGCAGTCTTGTTATACCTTAAAGGAAAGTATGAGAGTGAAGGTTGGGTGCAGAGTGAAAAGATTTCTGTGAAGGATGCCTTGAAAGTTCTAGTCTTGGATCCACTTAAAGCATCGTTGGGAGCTAAATCTGACTCGAGCTCTTTTCACATCCGTTTGACTTACTCTAAGGCATCAGATGAGGCTCAAGGTGCGTCGGAAACAACACATGAAAGAAAGAAGAGGAAAACAGACGAAGAGAATGGATCAACCTCTATGTCTGAGAATTCATTTGAAAAGGTTTATGAACCATGCATCTTGTCAGTTAATTGCAACAAGATGCCTATCTTTTTTAGTGGGAGATACTTTAAATACTCTAGAAATGTAAGTCAAACACGATGGATAATTGATGATGAAAGAATGGGTGAAGCGTCTGTTGAGGAGTTAATTGGTGGAAACATTCTTCCGGCATGCCTTGGGGATTCCTACAAGTTCCATGCTGCTGGCAGAGAAGATATTGATGTACGGATGTTGGGTTCAGGTAGACCTTTCTTAATCGAGGTTCAGAACTCCCGCAAATGCCCATCTCAGCAATCATTGATGGAAATTGAAGAGAAGATAAACAACTCAGAGAAAAAACTAGTCGGAGTTAAAGATCTTAAATTCATAGGAAGTCAGTGTTGGGCAATGATGCGTGAAGGAGAAGCAGAGAAACAGAAGCAATATGCTGCACTTGTATGGATTGCTCGTCCACTTGAAGAGAAAGATATCAACTCAATTTCTTCACTGATAGAATTGAAAATCTTGCAGAAGACACCGGTAAGAGTGCTTCACCGCCGAAGTCCGCTGGAACGTGAAAGGACTATACACTGGATGAAAGTGGAAAAGATAAAAGGAAGCTCTCACTACTTTCTACTGCATCTATGCACACAGGCTGGAACATACATCAAAGAGTTTGTTCATGGAGATCTTGGTCGTACCAGTCCAAGCATGGGATCAATTTTAGGATGCAGGGCGGAGATAATACAACTTGATGTCACTGATGTCAAAATGGGCGATTCTTGA |
| Protein: MSDETKPSSGDSSGLSNGLVSDSDRRVYEAARSLHSSAVKDLLSLGVCERCIFRLVSAEPFDSDLSSVSASTLRSWLEEASAAAAAASSEARVCIVCLGVLQFVFSVDAKQTLARSECGSDYAARVTELVKREGHEFDSFGLEVSVPSAVVENERAVLLYLKGKYESEGWVQSEKISVKDALKVLVLDPLKASLGAKSDSSSFHIRLTYSKASDEAQGASETTHERKKRKTDEENGSTSMSENSFEKVYEPCILSVNCNKMPIFFSGRYFKYSRNVSQTRWIIDDERMGEASVEELIGGNILPACLGDSYKFHAAGREDIDVRMLGSGRPFLIEVQNSRKCPSQQSLMEIEEKINNSEKKLVGVKDLKFIGSQCWAMMREGEAEKQKQYAALVWIARPLEEKDINSISSLIELKILQKTPVRVLHRRSPLERERTIHWMKVEKIKGSSHYFLLHLCTQAGTYIKEFVHGDLGRTSPSMGSILGCRAEIIQLDVTDVKMGDS |